Package index • epicR

All functions
`Cget_agent_events()`	Returns all events of an agent.
`Cget_all_events()`	Returns all events.
`Cget_all_events_matrix()`	Returns a matrix containing all events
`Cget_event()`	Returns the events stack.
`Cget_events_by_type()`	Returns all events of a certain type.
`Cget_inputs()`	Returns inputs
`Cget_n_events()`	Returns total number of events.
`Cget_output()`	Main outputs of the current run.
`Cget_output_ex()`	Extra outputs from the model
`Cget_runtime_stats()`	Returns run time stats.
`Cget_settings()`	Returns current settings.
`Cget_smith()`	Returns agent Smith.
`Cset_input_var()`	Sets input variables.
`Cset_settings_var()`	Sets model settings.
`calibrate_COPD_inc()`	Solves stochastically for COPD incidence rate equation.
`calibrate_explicit_mortality()`	Calibrates explicit mortality
`calibrate_explicit_mortality2()`	Calibrates explicit mortality by Amin
`calibrate_mi_incidence()`	Calibrates MI incidence.
`calibrate_smoking()`	Calibrates smoking
`epicR`	`epicR` package
`export_figures()`	Runs the model and exports an excel file with all output data
`express_matrix()`	Express matrix.
`get_agent_events()`	Returns events specific to an agent.
`get_all_events()`	Returns all events.
`get_default_settings()`	Exports default settings
`get_errors()`	Returns errors
`get_events_by_type()`	Returns certain events by type
`get_input()`	Returns a list of default model input values
`get_list_elements()`	Get list elements
`get_sample_output()`	Returns a sample output for a given year and gender.
`init_session()`	Initializes a model. Allocates memory to the C engine.
`mvrnormArma()`	Samples from a multivariate normal
`report_COPD_by_ctime()`	Reports COPD related stats.
`report_exacerbation_by_time()`	Reports exacerbation-related stats.
`resume()`	Resumes running of model.
`run()`	Runs the model, after a session has been initialized.
`sanity_COPD()`	Basic COPD test.
`sanity_check()`	Basic tests of model functionalty. Serious issues if the test does not pass.
`terminate_session()`	Terminates a session and releases allocated memory.
`test_case_detection()`	Returns results of Case Detection strategies
`validate_COPD()`	Returns results of validation tests for COPD
`validate_comorbidity()`	Returns results of validation tests for comorbidities
`validate_diagnosis()`	Returns results of validation tests for diagnosis
`validate_exacerbation()`	Returns results of validation tests for exacerbation rates
`validate_gpvisits()`	Returns results of validation tests for GP visits
`validate_lung_function()`	Returns results of validation tests for lung function
`validate_medication()`	Returns results of validation tests for medication module.
`validate_mortality()`	Returns results of validation tests for mortality rate
`validate_overdiagnosis()`	Returns results of validation tests for overdiagnosis
`validate_payoffs()`	Returns results of validation tests for payoffs, costs and QALYs
`validate_population()`	Returns results of validation tests for population module
`validate_smoking()`	Returns results of validation tests for smoking module.
`validate_survival()`	Returns the Kaplan Meier curve comparing COPD and non-COPD
`validate_symptoms()`	Returns results of validation tests for Symptoms
`validate_treatment()`	Returns results of validation tests for Treatment

Reference

All functions